RNA-Seq in doxycycline-treated mIMCD3
Published:
Doxycycline effects in mIMCD3
Citation: Jung HJ et al. (2021). "Doxycycline Changes the Transcriptome Profile of mIMCD3 Renal Epithelial Cells." Front Physiol. PMID: 37720991
Download Data | NCBI GEO
Posts by Collection
database
RNA-Seq in a Pkd2 knockout cell model (C125)
Published:
Pkd2-dependent transcriptome profile in a mouse Pkd2 knockout cell line newly estabilshed by PKD-RRC.
Citation: Jung HJ et al. (2023). "Polycystin-2-dependent transcriptome reveals early response of autosomal dominant polycystic kidney disease." Physiol Genomics. PMID: 37720991
Download Data | NCBI GEO
RNA-Seq in Ctnnb1 knockdown mpkCCD
Published:
Transcriptomic changes by Ctnnb1 knockdown in mpkCCD.
Citation: TBD
Download Data | NCBI GEO
RNA-Seq in MR knockout ASDN
Published:
Transcriptomic changes by MR knockout in kidney ASDN.
Citation: TBD
Download Data | NCBI GEO
RNA-Seq in mouse early DCT (furosemide treatment)
Published:
Transcriptomic profiles of mouse kidney early DCTs (furosemide treatment).
projects
Epithelial cell state dynamics in the kidney distal nephron
Cell state transition associated with physiological and pathophysiological processes in distal tubules
Transcriptional regulation of Aquaporin-2 in the kidney collecting duct
Molecular mechanisms in transcriptional regulation of water channel protein Aquaporin-2 (AQP2) in the kidney collecting duct
Cell state dynamics associated with breast cancer development
Cell state transition associated with the development of mammary gland tumorigenesis
Development of -omics tools
Pipelines and tools for analyzing and integrating multi-omics data.
publications
Aquaporin-5: a marker protein for proliferation and migration of human breast cancer cells
Published in PLoS One, 2011
Citation: Jung HJ et al. (2011). "Aquaporin-5: a marker protein for proliferation and migration of human breast cancer cells." PLoS One. PMID: 22145049
Molecular mechanisms regulating aquaporin-2 in kidney collecting duct
Published in Am J Physiol Renal Physiol, 2016
Citation: Jung HJ et al. (2016). "Molecular mechanisms regulating aquaporin-2 in kidney collecting duct." PLoS One. PMID: 27760771
Genome-Wide Mapping of DNA Accessibility and Binding Sites for CREB and C/EBPβ in Vasopressin-Sensitive Collecting Duct Cells
Published in J Am Soc Nephrol, 2018
Citation: Jung HJ et al. (2018). "Genome-Wide Mapping of DNA Accessibility and Binding Sites for CREB and C/EBP β in Vasopressin-Sensitive Collecting Duct Cells." J Am Soc Nephrol. PMID: 29572403
NGS-Integrator: An efficient tool for combining multiple NGS data tracks using minimum Bayes factors
Published in BMC Genomics, 2020
Citation: Wen B & Jung HJ et al. (2020). "NGS-Integrator: An efficient tool for combining multiple NGS data tracks using minimum Bayes factors." BMC Genomics. PMID: 33213365
Aquaporins implicated in the cell proliferation and the signaling pathways of cell stemness
Published in Biochimie, 2021
Citation: Jung HJ et al. (2021). "Aquaporins implicated in the cell proliferation and the signaling pathways of cell stemness." Biochimie. PMID: 33894294
Doxycycline Changes the Transcriptome Profile of mIMCD3 Renal Epithelial Cells
Published in Front Physiol, 2021
Citation: Jung HJ et al. (2021). "Doxycycline Changes the Transcriptome Profile of mIMCD3 Renal Epithelial Cells." Front Physiol. PMID: 37720991
Polycystin-2-dependent transcriptome reveals early response of autosomal dominant polycystic kidney disease
Published in Physiol Genomics, 2023
Citation: Jung HJ et al. (2023). "Polycystin-2-dependent transcriptome reveals early response of autosomal dominant polycystic kidney disease." Physiol Genomics. PMID: 37720991
Poly(ADP-ribose) polymerase-1 affects vasopressin-mediated AQP2 expression in collecting duct cells of the kidney
Published in Am J Physiol Renal Physiol, 2023
Citation: Jang H-J et al. (2023). "Poly(ADP-ribose) polymerase-1 affects vasopressin-mediated AQP2 expression in collecting duct cells of the kidney." Am J Physiol Renal Physiol. PMID: 37855039
Klotho is highly expressed in the chief sites of regulated potassium secretion, and it is stimulated by potassium intake
Published in Sci Rep, 2024
Citation: Jung HJ et al. (2024). "Klotho is highly expressed in the chief sites of regulated potassium secretion, and it is stimulated by potassium intake." Sci Rep. PMID: 38729987